Publications

2022:

Kay H, Taylor H, and van Ooijen, G. (2022) Environmental and circadian regulation combine to shape the rhythmic selenoproteome. Cells 11, 340.

Krahmer J, Hindle M, Perby LK, Mogensen HK, Nielsen TH, Halliday KJ, van Ooijen G, Le Bihan T, and Millar AJ (2022) The circadian clock gene circuit controls protein and phosphoprotein rhythms in Arabidopsis thaliana. Molecular and Cellular Proteomics 21(1), 100172

2021:

Kay H, Grünewald E, Feord HK, Gil S, Peak-Chew SY, Stangherlin A, O'Neill JS, van Ooijen G. (2021) Deep-coverage spatiotemporal proteome of the picoeukaryote Ostreococcus tauri reveals differential effects of environmental and endogenous 24-hour rhythms. Communications Biology 2021 Sep 30;4(1):1147

Stangherlin A, Watson JL, Wong DCS, Barbiero S, Zeng A, Seinkmane E, Peak-Chew SY, Beale AD, Hayter EA, Guna A, Inglis AJ, Putker M, Bartolami E, Matile S, Lequeux N, Pons T, Day J, van Ooijen G, Voorhees RM, Bechtold DA, Derivery E, Edgar RS, Newham P, O’Neill JS. (2021) Compensatory ion transport buffers daily protein rhythms to regulate osmotic balance and cellular physiology. Nature Communication 12(1):6035

2020:

Fustin JM, Ye S, Rakers C, Kaneko K, Fukumoto K, Yamano M, Versteven M, Grünewald E, Cargill SJ, Tamai TK, Xu Y, Jabbur ML, Kojima R, Lamberti ML, Yoshioka-Kobayashi K, Whitmore D, Tammam S, Howell PL, Kageyama R, Matsuo T, Stanewsky R, Golombek DA, Johnson CH, Kakeya H, van Ooijen G, Okamura H. (2020) Methylation deficiency disrupts biological rhythms from bacteria to humans. Communications Biology 3: 211

2019:

Feord HK, Dear FEG, Obbard DJ, van Ooijen G (2019) A magnesium transport protein related to mammalian SLC41 and bacterial MgtE contributes to circadian timekeeping in a unicellular green alga. Genes 10: 158.

2017:

Hansen LL, van den Burg HA, van Ooijen G (2017) Sumoylation contributes to timekeeping and temperature compensation of the plant circadian clock. Journal of Biological Rhythms 32: 560-9.

Hansen LL, Imrie L, Le Bihan T, van den Burg HA, van Ooijen G (2017) Sumoylation of the plant clock transcription factor CCA1 suppresses DNA binding. Journal of Biological Rhythms 32: 570-82.

2016:

Hansen LL, van Ooijen G (2016) Rapid analysis of circadian phenotypes in Arabidopsis protoplasts transfected with a luminescent clock reporter. Journal of Visualized Experiments 115: e54586, doi:10.3791/54586 - WATCH VIDEO

van Ooijen G, O’Neill JS (2016) Intracellular magnesium and the rhythms of life. Cell Cycle, 15: 2997-8

Feeney KA, Hansen LL, Putker M, Olivares-Yañez C, Day J, Eades LJ, Larrondo LF, Hoyle NP, O'Neill JS, van Ooijen G (2016) Daily magnesium fluxes regulate cellular timekeeping and energy balance. Nature 532: 375-9.

2015:

Le Bihan T, Hindle M, Martin SF, Barrios-Llerena ME, Krahmer J, Kis K, Millar AJ, van Ooijen G (2015) Label-free quantitative analysis of the casein kinase 2-responsive phosphoproteome of the marine minimal model species Ostreococcus tauri. Proteomics, 15: 4135-44

2014:

Guerriero ML, Akman OE, van Ooijen G (2014) Stochastic models of cellular circadian rhythms in plants help to understand the impact of noise on robustness and clock structure. Frontiers in Plant Science, 5: 564

Hindle MM, Martin SF, Noordally ZB, van Ooijen G, Barrios-Llerena ME, Simpson TI, Le Bihan T, Millar AJ (2014) The reduced kinome of Ostreococcus tauri: core eukaryotic signalling components in a tractable model species. BMC Genomics, 15: 640

Dixon LE, Hodge SK, van Ooijen G, Troein C, Akman OE, Millar AJ (2014) Light and circadian regulation of clock components aids flexible responses to environmental signals. New Phytologist, 203: 568-77

Spoel SH & van Ooijen G (2014) Circadian redox signalling in plant immunity and abiotic stress. Antioxidants & Redox signalling, 20: 3024-39

2013:

van Ooijen G, Martin SF, Barrios-Llerena ME, Hindle M, Le Bihan T, O'Neill JS, Millar AJ (2013) Functional analysis of the rodent CK1tau mutation in the circadian clock of a marine unicellular alga. BMC Cell Biology, 14: 46

van Ooijen G, Hindle M, Martin SF, Barrios-Llerena M, Sanchez F, Bouget F-Y, O'Neill JS, Le Bihan T, Millar AJ (2013) Functional analysis of Casein Kinase 1 in a minimal circadian system. PLoS One, 8: e70021

2012:

van Ooijen G & Millar AJ (2012) Non-transcriptional oscillators in circadian timekeeping. Trends in Biochemical Sciences, 37: 484-92

Edgar RS*, Green EW*, Zhao Y*, van Ooijen G*, Olmedo M*, Qin X, Xu Y, Pan M, Valekunja UK, Feeney KA, Maywood ES, Hastings MH, Baliga NS, Merrow M, Millar AJ, Johnson CH, Kyriacou CP, O'Neill JS, Reddy AB. (2012) Peroxiredoxins are conserved markers of circadian rhythms. Nature, 485: 459-64. *equal contribution

van Ooijen G, Knox K, Kis K, Bouget FY, Millar AJ (2012). Genomic transformation of the picoeukaryote Ostreococcus tauri. Journal of Visualized Experiments, 65, e4074, DOI: 10.3791/4074 - WATCH VIDEO

2011:

van Ooijen G, Dixon L, Troein C, Millar AJ (2011). Proteasome function is required for biological timing throughout the twenty-four hour cycle. Current Biology, 21: 869-75

Le Bihan T, Martin SF, Chirnside ES, van Ooijen G, Barrios-Llerena ME, O'Neill JS, Shliaha PV, Kerr LE, Millar AJ (2011). Shotgun proteomic analysis of the unicellular alga Ostreococcus tauri. Journal of Proteomics, 74: 2060-70

O’Neill JS*, van Ooijen G*, Dixon LE, Troein C, Corellou F, Bouget FY, Reddy AB, Millar AJ (2011). Circadian rhythms persist without transcription in a eukaryote. Nature, 469: 554-58. *equal contribution

Troein C, Corellou F, Dixon LE, van Ooijen G, O'Neill JS, Bouget FY, Millar AJ (2011). Multiple light inputs to a simple clock circuit allow complex biological rhythms. The Plant Journal, 66: 375-85

O'Neill JS, van Ooijen G, Le Bihan T, Millar AJ (2011). Circadian clock parameter measurement: Characterisation of clock transcription factors using Surface Plasmon Resonance. Journal of Biological Rhythms, 26: 91-98

2010:

van Ooijen G, Lukasik E, van den Burg HA, Vossen JH, Cornelissen BJC, Takken FLW (2010). RSI2 interacts with, and is required for function and stability of tomato resistance protein I-2. The Plant Journal, 63: 563-72

2009:

Houterman PM, Ma L, van Ooijen G, de Vroomen MJ, Cornelissen BJC, Takken FLW, Rep M (2009). The effector protein Avr2 of the xylem-colonizing fungus Fusarium oxysporum activates the tomato resistance protein I-2 intracellularly. The Plant Journal, 58: 970-978

2008:

View Gerben’s PhD thesis

van Ooijen G, Mayr G, Kasiem MMA, Albrecht M, Cornelissen BJC, Takken FLW (2008). Structure-function analysis of the NB-ARC domain of plant disease resistance proteins. Journal of Experimental Botany, 59: 1383-1397

van Ooijen G, Mayr G, Albrecht M, Cornelissen BJC, Takken FLW (2008). Transcomplementation, but not physical association of the CC-NB-ARC and LRR domains of tomato R protein Mi-1.2 is altered by mutations in the ARC2 subdomain. Molecular Plant, 1: 401-410

2007:

van Ooijen G, van den Burg HA, Cornelissen BJC, Takken FLW (2007). Structure and function of resistance proteins in solanaceous plants. Annual Review of Phytopathology, 45: 43-72

Gabriëls SHEJ, Vossen JH, Ekengren SK, van Ooijen G, Abd-El-Haliem AM, van den Berg GCM, Rainey DY, Martin GB, Takken FLW, de Wit PJGM, Joosten MHAJ (2007). An NB-LRR protein required for HR signalling mediated by both extra- and intracellular resistance proteins. The Plant Journal, 50: 14-28